Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-939 in B-CLL Leukemia Haslinger Cluster 8 Table contains all genes in the B-CLL Leukemia Haslinger cluster number 8. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-939 27238 GPKOW G patch domain and KOW motifs [Source:HGNC Symbol;Acc:30677] zzz999 3707 ITPKB inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:6179] T 5518 PPP2R1A protein phosphatase 2, regulatory subunit A, alpha [Source:HGNC Symbol;Acc:9302] T 10916 MAGED2 melanoma antigen family D, 2 [Source:HGNC Symbol;Acc:16353] zzz999 211 ALAS1 aminolevulinate, delta-, synthase 1 [Source:HGNC Symbol;Acc:396] zzz999 261726 TIPRL TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:HGNC Symbol;Acc:30231] zzz999 55794 DDX28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 [Source:HGNC Symbol;Acc:17330] zzz999 10121 ACTR1A ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) [Source:HGNC Symbol;Acc:167] zzz999 740 MRPL49 mitochondrial ribosomal protein L49 [Source:HGNC Symbol;Acc:1176] T 2975 GTF3C1 general transcription factor IIIC, polypeptide 1, alpha 220kDa [Source:HGNC Symbol;Acc:4664] T 23212 RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:17083] zzz999 10970 CKAP4 cytoskeleton-associated protein 4 [Source:HGNC Symbol;Acc:16991] zzz999 10670 RRAGA Ras-related GTP binding A [Source:HGNC Symbol;Acc:16963] zzz999 9903 KLHL21 kelch-like 21 (Drosophila) [Source:HGNC Symbol;Acc:29041] T 27301 APEX2 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:HGNC Symbol;Acc:17889] T 11072 DUSP14 dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:17007] T 5589 PRKCSH protein kinase C substrate 80K-H [Source:HGNC Symbol;Acc:9411] zzz999 7873 MANF mesencephalic astrocyte-derived neurotrophic factor [Source:HGNC Symbol;Acc:15461] zzz999 6749 SSRP1 structure specific recognition protein 1 [Source:HGNC Symbol;Acc:11327] T 6903 TBCC tubulin folding cofactor C [Source:HGNC Symbol;Acc:11580] zzz999 863 CBFA2T3 core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:HGNC Symbol;Acc:1537] T 1797 DOM3Z dom-3 homolog Z (C. elegans) [Source:HGNC Symbol;Acc:2992] zzz999 10857 PGRMC1 progesterone receptor membrane component 1 [Source:HGNC Symbol;Acc:16090] zzz999 11161 C14orf1 chromosome 14 open reading frame 1 [Source:HGNC Symbol;Acc:1187] T 11336 EXOC3 exocyst complex component 3 [Source:HGNC Symbol;Acc:30378] zzz999 5133 PDCD1 programmed cell death 1 [Source:HGNC Symbol;Acc:8760] T 10262 SF3B4 splicing factor 3b, subunit 4, 49kDa [Source:HGNC Symbol;Acc:10771] zzz999 55830 GLT8D1 glycosyltransferase 8 domain containing 1 [Source:HGNC Symbol;Acc:24870] zzz999 6652 SORD sorbitol dehydrogenase [Source:HGNC Symbol;Acc:11184] T 60343 FAM3A family with sequence similarity 3, member A [Source:HGNC Symbol;Acc:13749] zzz999 5093 PCBP1 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:8647] zzz999 9435 CHST2 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 [Source:HGNC Symbol;Acc:1970] zzz999 7133 TNFRSF1B tumor necrosis factor receptor superfamily, member 1B [Source:HGNC Symbol;Acc:11917] T 5119 CHMP1A chromatin modifying protein 1A [Source:HGNC Symbol;Acc:8740] T 53 ACP2 acid phosphatase 2, lysosomal [Source:HGNC Symbol;Acc:123] P T 9948 WDR1 WD repeat domain 1 [Source:HGNC Symbol;Acc:12754] zzz999 6117 RPA1 replication protein A1, 70kDa [Source:HGNC Symbol;Acc:10289] zzz999 474383 F8A3 coagulation factor VIII-associated 3 [Source:HGNC Symbol;Acc:31850] zzz999 5034 P4HB prolyl 4-hydroxylase, beta polypeptide [Source:HGNC Symbol;Acc:8548] zzz999 80335 WDR82 WD repeat domain 82 [Source:HGNC Symbol;Acc:28826] zzz999 23558 WBP2 WW domain binding protein 2 [Source:HGNC Symbol;Acc:12738] zzz999 26155 NOC2L nucleolar complex associated 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24517] zzz999 2783 GNB2 guanine nucleotide binding protein (G protein), beta polypeptide 2 [Source:HGNC Symbol;Acc:4398] zzz999 116985 ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:16925] zzz999 10607 TBL3 transducin (beta)-like 3 [Source:HGNC Symbol;Acc:11587] zzz999 23598 PATZ1 POZ (BTB) and AT hook containing zinc finger 1 [Source:HGNC Symbol;Acc:13071] zzz999 1727 CYB5R3 cytochrome b5 reductase 3 [Source:HGNC Symbol;Acc:2873] T 55810 FOXJ2 forkhead box J2 [Source:HGNC Symbol;Acc:24818] zzz999 921 CD5 CD5 molecule [Source:HGNC Symbol;Acc:1685] T 50488 MINK1 misshapen-like kinase 1 [Source:HGNC Symbol;Acc:17565] P T 7171 TPM4 tropomyosin 4 [Source:HGNC Symbol;Acc:12013] zzz999 79171 RBM42 RNA binding motif protein 42 [Source:HGNC Symbol;Acc:28117] zzz999 9846 GAB2 GRB2-associated binding protein 2 [Source:HGNC Symbol;Acc:14458] T 1912 PHC2 polyhomeotic homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:3183] P T 55884 WSB2 WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:19222] zzz999 9842 PLEKHM1 pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:HGNC Symbol;Acc:29017] T 22984 PDCD11 programmed cell death 11 [Source:HGNC Symbol;Acc:13408] zzz999 51706 CYB5R1 cytochrome b5 reductase 1 [Source:HGNC Symbol;Acc:13397] zzz999 8623 ASMTL acetylserotonin O-methyltransferase-like [Source:HGNC Symbol;Acc:751] zzz999 6293 VPS52 vacuolar protein sorting 52 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:10518] zzz999 26284 ERAL1 Era G-protein-like 1 (E. coli) [Source:HGNC Symbol;Acc:3424] T 94239 H2AFV H2A histone family, member V [Source:HGNC Symbol;Acc:20664] zzz999 7553 ZNF7 zinc finger protein 7 [Source:HGNC Symbol;Acc:13139] zzz999 22882 ZHX2 zinc fingers and homeoboxes 2 [Source:HGNC Symbol;Acc:18513] T 11243 PMF1 polyamine-modulated factor 1 [Source:HGNC Symbol;Acc:9112] zzz999 7278 TUBA3D tubulin, alpha 3d [Source:HGNC Symbol;Acc:24071] zzz999 4292 MLH1 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:HGNC Symbol;Acc:7127] zzz999 8637 EIF4EBP3 eukaryotic translation initiation factor 4E binding protein 3 [Source:HGNC Symbol;Acc:3290] zzz999 10657 KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 [Source:HGNC Symbol;Acc:18116] T 53335 BCL11A B-cell CLL/lymphoma 11A (zinc finger protein) [Source:HGNC Symbol;Acc:13221] zzz999 11100 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 [Source:HGNC Symbol;Acc:17011] T 10963 STIP1 stress-induced-phosphoprotein 1 [Source:HGNC Symbol;Acc:11387] zzz999 9452 ITM2A integral membrane protein 2A [Source:HGNC Symbol;Acc:6173] zzz999 10477 UBE2E3 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) [Source:HGNC Symbol;Acc:12479] T 131408 FAM131A family with sequence similarity 131, member A [Source:HGNC Symbol;Acc:28308] T 9526 MPDU1 mannose-P-dolichol utilization defect 1 [Source:HGNC Symbol;Acc:7207] T 11070 TMEM115 transmembrane protein 115 [Source:HGNC Symbol;Acc:30055] zzz999 23129 PLXND1 plexin D1 [Source:HGNC Symbol;Acc:9107] T 1802 DPH2 DPH2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:3004] zzz999 57142 RTN4 reticulon 4 [Source:HGNC Symbol;Acc:14085] zzz999 9957 HS3ST1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:5194] zzz999 10291 SF3A1 splicing factor 3a, subunit 1, 120kDa [Source:HGNC Symbol;Acc:10765] zzz999 5936 RBM4 RNA binding motif protein 4 [Source:HGNC Symbol;Acc:9901] zzz999 8312 AXIN1 axin 1 [Source:HGNC Symbol;Acc:903] zzz999 3609 ILF3 interleukin enhancer binding factor 3, 90kDa [Source:HGNC Symbol;Acc:6038] T 2286 FKBP2 FK506 binding protein 2, 13kDa [Source:HGNC Symbol;Acc:3718] zzz999 23107 MRPS27 mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:14512] T 3588 IL10RB interleukin 10 receptor, beta [Source:HGNC Symbol;Acc:5965] zzz999 6992 PPP1R11 protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:HGNC Symbol;Acc:9285] zzz999 8570 KHSRP KH-type splicing regulatory protein [Source:HGNC Symbol;Acc:6316] zzz999 10456 HAX1 HCLS1 associated protein X-1 [Source:HGNC Symbol;Acc:16915] zzz999 6737 TRIM21 tripartite motif containing 21 [Source:HGNC Symbol;Acc:11312] T 9679 FAM53B family with sequence similarity 53, member B [Source:HGNC Symbol;Acc:28968] T 9663 LPIN2 lipin 2 [Source:HGNC Symbol;Acc:14450] T 6541 SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:HGNC Symbol;Acc:11057] T 5571 PRKAG1 protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:HGNC Symbol;Acc:9385] zzz999 3611 ILK integrin-linked kinase [Source:HGNC Symbol;Acc:6040] T 5879 RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) [Source:HGNC Symbol;Acc:9801] T 6015 RING1 ring finger protein 1 [Source:HGNC Symbol;Acc:10018] zzz999 7077 TIMP2 TIMP metallopeptidase inhibitor 2 [Source:HGNC Symbol;Acc:11821] T 113419 TEX261 testis expressed 261 [Source:HGNC Symbol;Acc:30712] T 223 ALDH9A1 aldehyde dehydrogenase 9 family, member A1 [Source:HGNC Symbol;Acc:412] zzz999 9817 KEAP1 kelch-like ECH-associated protein 1 [Source:HGNC Symbol;Acc:23177] zzz999 2000 ELF4 E74-like factor 4 (ets domain transcription factor) [Source:HGNC Symbol;Acc:3319] zzz999 754 PTTG1IP pituitary tumor-transforming 1 interacting protein [Source:HGNC Symbol;Acc:13524] T 8099 CDK2AP1 cyclin-dependent kinase 2 associated protein 1 [Source:HGNC Symbol;Acc:14002] zzz999 23 ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1 [Source:HGNC Symbol;Acc:70] zzz999 392 ARHGAP1 Rho GTPase activating protein 1 [Source:HGNC Symbol;Acc:673] zzz999 23476 BRD4 bromodomain containing 4 [Source:HGNC Symbol;Acc:13575] T 84364 ARFGAP2 ADP-ribosylation factor GTPase activating protein 2 [Source:HGNC Symbol;Acc:13504] zzz999 3104 ZBTB48 zinc finger and BTB domain containing 48 [Source:HGNC Symbol;Acc:4930] zzz999 9810 RNF40 ring finger protein 40 [Source:HGNC Symbol;Acc:16867] T 1605 DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) [Source:HGNC Symbol;Acc:2666] P T 10664 CTCF CCCTC-binding factor (zinc finger protein) [Source:HGNC Symbol;Acc:13723] zzz999 10318 TNIP1 TNFAIP3 interacting protein 1 [Source:HGNC Symbol;Acc:16903] zzz999 6503 SLA Src-like-adaptor [Source:HGNC Symbol;Acc:10902] zzz999 3396 ICT1 immature colon carcinoma transcript 1 [Source:HGNC Symbol;Acc:5359] zzz999 24148 PRPF6 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:15860] zzz999 9733 SART3 squamous cell carcinoma antigen recognized by T cells 3 [Source:HGNC Symbol;Acc:16860] T 267 AMFR autocrine motility factor receptor [Source:HGNC Symbol;Acc:463] zzz999 200081 TXLNA taxilin alpha [Source:HGNC Symbol;Acc:30685] zzz999 23125 CAMTA2 calmodulin binding transcription activator 2 [Source:HGNC Symbol;Acc:18807] T 4926 NUMA1 nuclear mitotic apparatus protein 1 [Source:HGNC Symbol;Acc:8059] zzz999 80301 PLEKHO2 pleckstrin homology domain containing, family O member 2 [Source:HGNC Symbol;Acc:30026] zzz999 4245 MGAT1 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:7044] T 8295 TRRAP transformation/transcription domain-associated protein [Source:HGNC Symbol;Acc:12347] zzz999 25844 YIPF3 Yip1 domain family, member 3 [Source:HGNC Symbol;Acc:21023] T

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